Genomics Curriculum

Key Info
Description - a brief synopsis, abstract or summary of what the learning resource is about: 

The focus of this workshop is on working with genomics data and data management and analysis for genomics research. It covers data management and analysis for genomics research including best practices for the organization of bioinformatics projects and data, use of command line utilities, use of command line tools to analyze sequence quality and perform variant calling, and connecting to and using cloud computing.
Lessons:

  • Project organization and management
  • Introduction to the command line
  • Data wrangling and processing
  • Introduction to cloud computing for genomics
  • Data analysis and visualization in R *beta*
Authoring Person(s) Name: 
Erin Becker
Authoring Organization(s) Name: 
Data Carpentry
License - link to legal statement specifying the copyright status of the learning resource: 
Creative Commons Attribution 2.0 Generic - CC BY 2.0
Access Cost: 
No fee
Primary language(s) in which the learning resource was originally published or made available: 
English
More info about
Keywords - short phrases describing what the learning resource is about: 
Data visualization tools
Data visuallization
Data wrangling
Genomics data
Interoperable data - FAIR Data Principle
Re-usable data - FAIR Data Principle
Workshop curriculum
Subject Discipline - subject domain(s) toward which the learning resource is targeted: 
Life Sciences: Genetics and Genomics
Published / Broadcast: 
Saturday, April 1, 2017
Publisher - organization credited with publishing or broadcasting the learning resource: 
Data Carpentry
Version - revision or edition number or date associated with a learning resource: 
Version 2017.11.0
Media Type - designation of the form in which the content of the learning resource is represented, e.g., moving image: 
Collection - a group or set of items that comprise a single learning resource, e.g., a PDF version of a slide presentation, an audio file of the presentation and a textual representation of the oral transcription of the presentation.
Educational Info
Purpose - primary educational reason for which the learning resource was created: 
Instruction - detailed information about aspects or processes related to data management.
Learning Resource Type - category of the learning resource from the point of view of a professional educator: 
Educator Curriculum Guide - document that defines what concepts should be taught and/or how a concept should be taught effectively.
Target Audience - intended audience for which the learning resource was created: 
Librarian
Educator
Intended time to complete - approximate amount of time the average student will take to complete the learning resource: 
More than 1 Day (but less than 1 week)
Framework - A community-based organization plan or set of steps for education or training: 
FAIR Data Principles